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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899014.1_cds_XP_016448950.1_43552
CDS Infomation

[gene=LOC107774019] [db_xref=GeneID:107774019] [protein=oxysterol-binding protein-related protein 1B-like isoform X2] [protein_id=XP_016448950.1] [location=complement(join(1236..1394,1779..1892,2145..2366,2568..2708,2783..2950,3128..3283,3366..3805,4415..4631,5674..6054))] [gbkey=CDS]
Sequence

ATGCATCTTTTGTGTTGTAACCAAAAAATCATGCATCTTTTATGCTGTGTCACCGCCGTG
GCTGACAAAAACACGGCGGCAGTACGTCGTCGTCCACCGCACGCGGCTGCTCCGATGAAC
GAAAGTGATAATCTAGGGAATGGAATTTGTGGAATACTATACAAATGGGTAAATTTTGGT
AAAGGGTGGCGGCCCCGTTGGTTTGTTCTACATGATGGTGTGCTTTCGTATTACAAAATT
CATGGACACAAGAAAATTGTGATTAATTTAGAAATGGTAAAAGGATTCAATGTTATAGGG
AAGAAATCATTTCGGTTTATTAATAGCTCTAAATCAACCCCTTACAAATCCCTCGGCCGC
AAACCATTACGTCAAATCCAGGTGTCATCAGTAATGGGAAGTTGTTCAGATGAACGGCGG
TTTTTGATAAATGCTGGGAAGAAGAAGCTGCATTTGAGGGCAGAGACTAAAGAGGACAGA
TTAACATGGTTGGAAGGATTGGTTGCAGCTAAGAAGTCATATTTAACAAATGATTTTGTT
CATATGCCAAGAATGAACACTAATTGCAAGGTTGCAACTCAAGAGAGCAAGATGAAAGGA
AGGAACGCGAGTGGATCATATGAAGAGCAGTATAGGCAAGCGGAAACTGAGGATGATGTT
CACACCGATAACTTGTTTTTTGATGCTAAAGATTTTCTTTCCTCTAGTTCGTTAAGAAGC
ACCGAGCCTTATGATGAAAGCTCGTCTTCTGATTCTGAGAATGAGGAGGTTCATCCATCT
GAAGATGGTCTTAGTTCTTTTATGAGATTTGTTGAATGTGACTATCCGTATATAAAGCGA
AGAGAGAAATTGCCTAATCCAGTTGAAGAGGAAAAGGGAGTAAGCCTATGGTCAATGATC
AAAGATAACATTGGAAAGGATCTAACTAGAGTTTGTCTTCCTGTGTACTTCAACGAACCG
CTCTCTTCTCTGCAGAAATGTTTTGAAGATTTTGAGTATTCTTACCTTCTTGATCAAGCT
TATGAATGGGGAAAAACAGGTAATAGCTTTATGAGGATGCTGAATGTAGCAGCATTTGCT
GTATCTGGATATGCTTGTACGGATGGTAGAAGATTCAAGCCATTCAATCCATTGTTGGGC
GAGACGTATGAAGCCAATTACCCAGACAAGGGACTGCGTTTCATCTCAGAGAAGGTAAGT
CATCACCCCTTGACTCTTGCTTGCCATTGTGAAGGACGTGGTTGGAAAATGTGGGGAGAT
ACTACTTTAAAAAATAAATTTTGGGGTCCATCAATTCAACTTGATCCAGTTGGTGTCCTT
AACTTAGAGTTTGATGATGGAGAAGTATTCCGGTGGAGCAAGGTAACAACTTCAATCTAC
AACCTCATTTTAGGGAAACTCTATTGCGAACACTATGGTATGATGCATATCGAAGGAAAT
GGCGACTACTCTTGCAAGCTTAAATTTAAGAAGCAGTCCATTATGAATAGAAATCCACAC
CAGGTACATGGAGTTGTACAAGATAGGAGTCCAAAGACAGTGGCGACTGTGTTTGGGAAA
TGGGATGAAAGTTTGTATTACTGTAACGGGGATAGCTCATCGATGGATTTAGGACAAGAT
AAGGCATATTTGCTTTGGAAGCGGCGCAAATCATCAGAATTCCAAACAAAGTATAACTTT
ACGCGTTTTGCAATCACCCTTAATGAGCTATCTCCTGATCTTGAGGAAAAGTTGCCTCCA
ACAGATTCAAGGCTTAGACCTGATCAAAGATATCTTGAAAATGGAGAGTATGAAATTGCT
AATTCAGAAAAGCTACGTCTAGAGAAGAGACAACGCCAGGCATCAAAGATGCAGGAAAGA
GGCTGGAAACCAAGGTGGTTTACAAAGACAAAAGGTAGTGATACATATCAGTATAAAGGA
GGATATTGGGAAGCCAGAGAAACTGGTAAATGGGAATCATGTCCATATATTTTTGGTGAA
GTTTCAGATGAAATTTGA

Peptide Sequence

PEP ID

XP_016448950.1
PEP Infomation

PREDICTED: oxysterol-binding protein-related protein 1B-like isoform X2 [Nicotiana tabacum]
Sequence

MHLLCCNQKIMHLLCCVTAVADKNTAAVRRRPPHAAAPMNESDNLGNGICGILYKWVNFG
KGWRPRWFVLHDGVLSYYKIHGHKKIVINLEMVKGFNVIGKKSFRFINSSKSTPYKSLGR
KPLRQIQVSSVMGSCSDERRFLINAGKKKLHLRAETKEDRLTWLEGLVAAKKSYLTNDFV
HMPRMNTNCKVATQESKMKGRNASGSYEEQYRQAETEDDVHTDNLFFDAKDFLSSSSLRS
TEPYDESSSSDSENEEVHPSEDGLSSFMRFVECDYPYIKRREKLPNPVEEEKGVSLWSMI
KDNIGKDLTRVCLPVYFNEPLSSLQKCFEDFEYSYLLDQAYEWGKTGNSFMRMLNVAAFA
VSGYACTDGRRFKPFNPLLGETYEANYPDKGLRFISEKVSHHPLTLACHCEGRGWKMWGD
TTLKNKFWGPSIQLDPVGVLNLEFDDGEVFRWSKVTTSIYNLILGKLYCEHYGMMHIEGN
GDYSCKLKFKKQSIMNRNPHQVHGVVQDRSPKTVATVFGKWDESLYYCNGDSSSMDLGQD
KAYLLWKRRKSSEFQTKYNFTRFAITLNELSPDLEEKLPPTDSRLRPDQRYLENGEYEIA
NSEKLRLEKRQRQASKMQERGWKPRWFTKTKGSDTYQYKGGYWEARETGKWESCPYIFGE
VSDEI

Transcript Sequence

Gene sequence data has not been registered.